Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Gm21470-201ENSMUST00000187680 696 ntBASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Gm7775-201ENSMUST00000218871 853 ntBASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf111Q99ML9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Gm11434-201ENSMUST00000122379 629 ntBASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Gm29741-201ENSMUST00000192667 421 ntBASIC13.06□□□□□ -0.32
Rnf111Q99ML9 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Rnf111Q99ML9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms