Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk5rap3Q99LM2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdk5rap3Q99LM2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdk5rap3Q99LM2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdk5rap3Q99LM2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdk5rap3Q99LM2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdk5rap3Q99LM2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdk5rap3Q99LM2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cdk5rap3Q99LM2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
Cdk5rap3Q99LM2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Gm15678-201ENSMUST00000117573 960 ntBASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Gm27618-201ENSMUST00000183671 60 ntBASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Gm27680-201ENSMUST00000184192 160 ntBASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Gm27702-201ENSMUST00000184512 56 ntBASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk5rap3Q99LM2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk5rap3Q99LM2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms