Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.12□□□□□ -0.15
Clp1Q99LI9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.12□□□□□ -0.15
Clp1Q99LI9 Gm10434-201ENSMUST00000101158 471 ntBASIC14.12□□□□□ -0.15
Clp1Q99LI9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Gm13316-201ENSMUST00000140537 691 ntBASIC14.12□□□□□ -0.15
Clp1Q99LI9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Clp1Q99LI9 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Gm16505-201ENSMUST00000179981 232 ntBASIC14.12□□□□□ -0.15
Clp1Q99LI9 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.12□□□□□ -0.15
Clp1Q99LI9 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.12□□□□□ -0.15
Clp1Q99LI9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clp1Q99LI9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Clp1Q99LI9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Gm24830-201ENSMUST00000102024 166 ntBASIC14.11□□□□□ -0.15
Clp1Q99LI9 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.11□□□□□ -0.15
Clp1Q99LI9 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Gm25890-201ENSMUST00000177643 165 ntBASIC14.11□□□□□ -0.15
Clp1Q99LI9 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.11□□□□□ -0.15
Clp1Q99LI9 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.11□□□□□ -0.15
Clp1Q99LI9 Gm22614-201ENSMUST00000178300 165 ntBASIC14.11□□□□□ -0.15
Clp1Q99LI9 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Rps4l-202ENSMUST00000204242 789 ntBASIC14.11□□□□□ -0.15
Clp1Q99LI9 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Gm22042-201ENSMUST00000082989 165 ntBASIC14.11□□□□□ -0.15
Clp1Q99LI9 Gm26232-201ENSMUST00000083360 166 ntBASIC14.11□□□□□ -0.15
Clp1Q99LI9 Gm24136-201ENSMUST00000083374 165 ntBASIC14.11□□□□□ -0.15
Clp1Q99LI9 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.11□□□□□ -0.15
Clp1Q99LI9 Gm26110-201ENSMUST00000083971 165 ntBASIC14.11□□□□□ -0.15
Clp1Q99LI9 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.11□□□□□ -0.15
Clp1Q99LI9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clp1Q99LI9 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.1□□□□□ -0.15
Clp1Q99LI9 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clp1Q99LI9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms