Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RtcbQ99LF4 Gm11439-201ENSMUST00000118598 409 ntBASIC16.52■□□□□ 0.24
RtcbQ99LF4 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RtcbQ99LF4 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RtcbQ99LF4 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RtcbQ99LF4 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RtcbQ99LF4 Gm13097-201ENSMUST00000210722 397 ntBASIC16.52■□□□□ 0.24
RtcbQ99LF4 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC16.52■□□□□ 0.24
RtcbQ99LF4 Abhd11os-203ENSMUST00000222613 363 ntBASIC16.52■□□□□ 0.24
RtcbQ99LF4 AC069562.3-201ENSMUST00000225387 587 ntBASIC16.52■□□□□ 0.24
RtcbQ99LF4 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RtcbQ99LF4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RtcbQ99LF4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RtcbQ99LF4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RtcbQ99LF4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.52■□□□□ 0.23
RtcbQ99LF4 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RtcbQ99LF4 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RtcbQ99LF4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RtcbQ99LF4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC16.51■□□□□ 0.23
RtcbQ99LF4 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Gm9678-201ENSMUST00000198979 1149 ntBASIC16.51■□□□□ 0.23
RtcbQ99LF4 Gm19963-201ENSMUST00000208413 1255 ntBASIC16.51■□□□□ 0.23
RtcbQ99LF4 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.51■□□□□ 0.23
RtcbQ99LF4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RtcbQ99LF4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Gm14028-201ENSMUST00000117434 479 ntBASIC16.5■□□□□ 0.23
RtcbQ99LF4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Gm44967-201ENSMUST00000207047 631 ntBASIC16.5■□□□□ 0.23
RtcbQ99LF4 Gm19208-201ENSMUST00000213861 912 ntBASIC16.5■□□□□ 0.23
RtcbQ99LF4 AC126253.1-202ENSMUST00000226732 835 ntBASIC16.5■□□□□ 0.23
RtcbQ99LF4 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RtcbQ99LF4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RtcbQ99LF4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RtcbQ99LF4 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC16.49■□□□□ 0.23
RtcbQ99LF4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RtcbQ99LF4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RtcbQ99LF4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RtcbQ99LF4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RtcbQ99LF4 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RtcbQ99LF4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC16.49■□□□□ 0.23
RtcbQ99LF4 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RtcbQ99LF4 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RtcbQ99LF4 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RtcbQ99LF4 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC16.49■□□□□ 0.23
RtcbQ99LF4 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC16.49■□□□□ 0.23
RtcbQ99LF4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
RtcbQ99LF4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RtcbQ99LF4 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms