Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Gm25948-201ENSMUST00000175334 112 ntBASIC12.28□□□□□ -0.44
Lims1Q99JW4 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Gm27618-201ENSMUST00000183671 60 ntBASIC12.28□□□□□ -0.44
Lims1Q99JW4 Gm27321-201ENSMUST00000185021 205 ntBASIC12.28□□□□□ -0.44
Lims1Q99JW4 Gm44344-201ENSMUST00000200287 129 ntBASIC12.28□□□□□ -0.44
Lims1Q99JW4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.28□□□□□ -0.44
Lims1Q99JW4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lims1Q99JW4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lims1Q99JW4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Lims1Q99JW4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lims1Q99JW4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lims1Q99JW4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lims1Q99JW4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lims1Q99JW4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lims1Q99JW4 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lims1Q99JW4 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lims1Q99JW4 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lims1Q99JW4 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.27□□□□□ -0.44
Lims1Q99JW4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.27□□□□□ -0.44
Lims1Q99JW4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lims1Q99JW4 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lims1Q99JW4 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Lims1Q99JW4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.27□□□□□ -0.45
Lims1Q99JW4 Gm38294-201ENSMUST00000192831 381 ntBASIC12.27□□□□□ -0.45
Lims1Q99JW4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
Lims1Q99JW4 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lims1Q99JW4 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lims1Q99JW4 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lims1Q99JW4 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lims1Q99JW4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lims1Q99JW4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Lims1Q99JW4 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Lims1Q99JW4 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.26□□□□□ -0.45
Lims1Q99JW4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lims1Q99JW4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lims1Q99JW4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.26□□□□□ -0.45
Lims1Q99JW4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lims1Q99JW4 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.26□□□□□ -0.45
Lims1Q99JW4 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.26□□□□□ -0.45
Lims1Q99JW4 Gm17330-201ENSMUST00000221047 165 ntBASIC12.26□□□□□ -0.45
Lims1Q99JW4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lims1Q99JW4 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lims1Q99JW4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms