Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clip1Q922J3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clip1Q922J3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clip1Q922J3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clip1Q922J3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC20.9■□□□□ 0.94
Clip1Q922J3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clip1Q922J3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC20.9■□□□□ 0.94
Clip1Q922J3 Gm7118-201ENSMUST00000200167 1003 ntBASIC20.9■□□□□ 0.94
Clip1Q922J3 Gm18584-201ENSMUST00000203098 964 ntBASIC20.9■□□□□ 0.94
Clip1Q922J3 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clip1Q922J3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clip1Q922J3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clip1Q922J3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clip1Q922J3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clip1Q922J3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clip1Q922J3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clip1Q922J3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clip1Q922J3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Clip1Q922J3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clip1Q922J3 Tmed9-203ENSMUST00000224741 1450 ntBASIC20.9■□□□□ 0.94
Clip1Q922J3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clip1Q922J3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clip1Q922J3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clip1Q922J3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clip1Q922J3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clip1Q922J3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Clip1Q922J3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clip1Q922J3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clip1Q922J3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clip1Q922J3 Gm15808-201ENSMUST00000119046 604 ntBASIC20.89■□□□□ 0.93
Clip1Q922J3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clip1Q922J3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC20.89■□□□□ 0.93
Clip1Q922J3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC20.89■□□□□ 0.93
Clip1Q922J3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC20.89■□□□□ 0.93
Clip1Q922J3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clip1Q922J3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clip1Q922J3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clip1Q922J3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Clip1Q922J3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clip1Q922J3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clip1Q922J3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clip1Q922J3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clip1Q922J3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clip1Q922J3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
Clip1Q922J3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clip1Q922J3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clip1Q922J3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clip1Q922J3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Clip1Q922J3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clip1Q922J3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip1Q922J3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip1Q922J3 Gm12539-201ENSMUST00000121549 1098 ntBASIC20.88■□□□□ 0.93
Clip1Q922J3 Gm6161-201ENSMUST00000121942 1102 ntBASIC20.88■□□□□ 0.93
Clip1Q922J3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Clip1Q922J3 Gm6254-201ENSMUST00000168178 1072 ntBASIC20.88■□□□□ 0.93
Clip1Q922J3 Gm6153-201ENSMUST00000172004 1058 ntBASIC20.88■□□□□ 0.93
Clip1Q922J3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Clip1Q922J3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC20.88■□□□□ 0.93
Clip1Q922J3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC20.88■□□□□ 0.93
Clip1Q922J3 Gm5641-202ENSMUST00000198699 1080 ntBASIC20.88■□□□□ 0.93
Clip1Q922J3 n-R5s77-201ENSMUST00000083757 119 ntBASIC20.88■□□□□ 0.93
Clip1Q922J3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC20.88■□□□□ 0.93
Clip1Q922J3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip1Q922J3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip1Q922J3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip1Q922J3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Clip1Q922J3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip1Q922J3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip1Q922J3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip1Q922J3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip1Q922J3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Clip1Q922J3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip1Q922J3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Clip1Q922J3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip1Q922J3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clip1Q922J3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clip1Q922J3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clip1Q922J3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clip1Q922J3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clip1Q922J3 Gm37489-201ENSMUST00000191883 159 ntBASIC20.87■□□□□ 0.93
Clip1Q922J3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC20.87■□□□□ 0.93
Clip1Q922J3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clip1Q922J3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Clip1Q922J3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clip1Q922J3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
Clip1Q922J3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Clip1Q922J3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clip1Q922J3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clip1Q922J3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clip1Q922J3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Clip1Q922J3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clip1Q922J3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC20.87■□□□□ 0.93
Clip1Q922J3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clip1Q922J3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC20.87■□□□□ 0.93
Clip1Q922J3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clip1Q922J3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Clip1Q922J3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Clip1Q922J3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clip1Q922J3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms