Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm25349-201ENSMUST00000177728 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm23616-201ENSMUST00000177797 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm25871-201ENSMUST00000177816 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm24752-201ENSMUST00000178240 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm24496-201ENSMUST00000178287 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm25649-201ENSMUST00000178476 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm25548-201ENSMUST00000178681 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm23147-201ENSMUST00000178841 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm26095-201ENSMUST00000179270 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm22171-201ENSMUST00000179283 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm23936-201ENSMUST00000179354 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm22619-201ENSMUST00000179516 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm25255-201ENSMUST00000179579 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm24755-201ENSMUST00000179691 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm26506-201ENSMUST00000179692 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm25086-201ENSMUST00000179931 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm23243-201ENSMUST00000180047 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm24659-201ENSMUST00000180212 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm24169-201ENSMUST00000180244 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm23689-201ENSMUST00000180354 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm27359-201ENSMUST00000184153 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm27785-201ENSMUST00000184268 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm27466-201ENSMUST00000184396 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm27703-201ENSMUST00000184836 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 AC125539.1-202ENSMUST00000226449 670 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm42535-201ENSMUST00000197312 1399 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Gm6973-201ENSMUST00000117080 721 ntBASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb3Q91XZ7 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms