Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rpap2Q8VC34 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpap2Q8VC34 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpap2Q8VC34 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Gm44397-201ENSMUST00000195950 113 ntBASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Gm26315-201ENSMUST00000083890 321 ntBASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.76□□□□□ -0.05
Rpap2Q8VC34 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpap2Q8VC34 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Gm15429-201ENSMUST00000151268 798 ntBASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Gm45841-201ENSMUST00000207700 164 ntBASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpap2Q8VC34 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 272.5 ms