Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps39Q8R5L3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Mir874-201ENSMUST00000104769 76 ntBASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.49□□□□□ -0.25
Vps39Q8R5L3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Vps39Q8R5L3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Gm17795-201ENSMUST00000214505 757 ntBASIC13.48□□□□□ -0.25
Vps39Q8R5L3 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.48□□□□□ -0.25
Vps39Q8R5L3 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.48□□□□□ -0.25
Vps39Q8R5L3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps39Q8R5L3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps39Q8R5L3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms