Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nup35Q8R4R6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nup35Q8R4R6 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Gm11745-201ENSMUST00000121669 448 ntBASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Gm1401-201ENSMUST00000122048 772 ntBASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Gm8927-201ENSMUST00000181978 981 ntBASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Dupd1-202ENSMUST00000224735 548 ntBASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Gm3222-201ENSMUST00000071282 990 ntBASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Gm10819-201ENSMUST00000099988 561 ntBASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nup35Q8R4R6 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nup35Q8R4R6 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nup35Q8R4R6 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nup35Q8R4R6 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nup35Q8R4R6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nup35Q8R4R6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nup35Q8R4R6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nup35Q8R4R6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nup35Q8R4R6 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nup35Q8R4R6 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nup35Q8R4R6 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nup35Q8R4R6 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nup35Q8R4R6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms