Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc58Q8R3Q6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Gm11025-201ENSMUST00000140773 466 ntBASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Gm9727-201ENSMUST00000161387 555 ntBASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Gm18027-201ENSMUST00000218947 619 ntBASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Map1b-203ENSMUST00000223725 2669 ntBASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc58Q8R3Q6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Gm6222-201ENSMUST00000120787 396 ntBASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Gm6443-201ENSMUST00000203599 874 ntBASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc58Q8R3Q6 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms