Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Gm38144-201ENSMUST00000192790 465 ntBASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Gm42550-201ENSMUST00000201553 960 ntBASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Gm45384-201ENSMUST00000210451 277 ntBASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.47■□□□□ 0.23
Sf3a1Q8K4Z5 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Gm12490-201ENSMUST00000120255 560 ntBASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Gm28911-201ENSMUST00000188837 117 ntBASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sf3a1Q8K4Z5 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sf3a1Q8K4Z5 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Sf3a1Q8K4Z5 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Sf3a1Q8K4Z5 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Gm12138-201ENSMUST00000122180 951 ntBASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Gm15429-201ENSMUST00000151268 798 ntBASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Gm29608-201ENSMUST00000190444 463 ntBASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Gm6983-201ENSMUST00000214912 628 ntBASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sf3a1Q8K4Z5 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Gm15371-201ENSMUST00000117057 784 ntBASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sf3a1Q8K4Z5 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms