Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Mir497b-201ENSMUST00000093601 125 ntBASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cnot3Q8K0V4 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cnot3Q8K0V4 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Gm18049-201ENSMUST00000208909 581 ntBASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cnot3Q8K0V4 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms