Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm38049-201ENSMUST00000195698 1372 ntBASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 AC135669.1-202ENSMUST00000216742 540 ntBASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Gm8399-201ENSMUST00000082300 1117 ntBASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Gm5620-201ENSMUST00000077991 1348 ntBASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.35■□□□□ 0.37
Rab11fip3Q8CHD8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Tyms-ps-201ENSMUST00000219550 915 ntBASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab11fip3Q8CHD8 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab11fip3Q8CHD8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
Rab11fip3Q8CHD8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab11fip3Q8CHD8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab11fip3Q8CHD8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rab11fip3Q8CHD8 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rab11fip3Q8CHD8 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab11fip3Q8CHD8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab11fip3Q8CHD8 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab11fip3Q8CHD8 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.33■□□□□ 0.36
Rab11fip3Q8CHD8 AC134254.1-201ENSMUST00000221362 167 ntBASIC17.33■□□□□ 0.36
Rab11fip3Q8CHD8 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab11fip3Q8CHD8 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab11fip3Q8CHD8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Rab11fip3Q8CHD8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab11fip3Q8CHD8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Rab11fip3Q8CHD8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC17.33■□□□□ 0.36
Rab11fip3Q8CHD8 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab11fip3Q8CHD8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.33■□□□□ 0.36
Rab11fip3Q8CHD8 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
Rab11fip3Q8CHD8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab11fip3Q8CHD8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rab11fip3Q8CHD8 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab11fip3Q8CHD8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms