Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Brf1Q8CFK2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Brf1Q8CFK2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.24■□□□□ 0.19
Brf1Q8CFK2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Brf1Q8CFK2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Brf1Q8CFK2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Brf1Q8CFK2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Brf1Q8CFK2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.24■□□□□ 0.19
Brf1Q8CFK2 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.24■□□□□ 0.19
Brf1Q8CFK2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.24■□□□□ 0.19
Brf1Q8CFK2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Brf1Q8CFK2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Brf1Q8CFK2 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.24■□□□□ 0.19
Brf1Q8CFK2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Brf1Q8CFK2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Brf1Q8CFK2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.24■□□□□ 0.19
Brf1Q8CFK2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Brf1Q8CFK2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Brf1Q8CFK2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brf1Q8CFK2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Gm15429-201ENSMUST00000151268 798 ntBASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Gm45242-201ENSMUST00000210666 2129 ntBASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brf1Q8CFK2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Brf1Q8CFK2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.21■□□□□ 0.19
Brf1Q8CFK2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brf1Q8CFK2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Brf1Q8CFK2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brf1Q8CFK2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brf1Q8CFK2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.21■□□□□ 0.19
Brf1Q8CFK2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.21■□□□□ 0.19
Brf1Q8CFK2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.21■□□□□ 0.19
Brf1Q8CFK2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.21■□□□□ 0.19
Brf1Q8CFK2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.21■□□□□ 0.19
Brf1Q8CFK2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Brf1Q8CFK2 Gm6745-201ENSMUST00000199216 526 ntBASIC16.21■□□□□ 0.19
Brf1Q8CFK2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brf1Q8CFK2 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.21■□□□□ 0.19
Brf1Q8CFK2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brf1Q8CFK2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brf1Q8CFK2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brf1Q8CFK2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Brf1Q8CFK2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Brf1Q8CFK2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms