Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc28bQ8CEG5 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Gm45612-201ENSMUST00000211320 160 ntBASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Mir497b-201ENSMUST00000093601 125 ntBASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.29□□□□□ -0.28
Ccdc28bQ8CEG5 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc28bQ8CEG5 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms