Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Gm9063-201ENSMUST00000223299 582 ntBASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcpip1Q8CDG3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Mir7684-201ENSMUST00000183858 60 ntBASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcpip1Q8CDG3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Vcpip1Q8CDG3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.46□□□□□ -0.09
Vcpip1Q8CDG3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms