Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pabpn1Q8CCS6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Mir181d-201ENSMUST00000102383 72 ntBASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Gm6397-201ENSMUST00000161973 1069 ntBASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Gm23363-201ENSMUST00000175024 79 ntBASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Pabpn1Q8CCS6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Gm38297-201ENSMUST00000195122 1057 ntBASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 AC129219.2-201ENSMUST00000224324 701 ntBASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Arhgef33-210ENSMUST00000225548 456 ntBASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 AC108416.1-202ENSMUST00000228927 1201 ntBASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 n-R5s211-201ENSMUST00000093689 119 ntBASIC20.33■□□□□ 0.85
Pabpn1Q8CCS6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pabpn1Q8CCS6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pabpn1Q8CCS6 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pabpn1Q8CCS6 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pabpn1Q8CCS6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Pabpn1Q8CCS6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pabpn1Q8CCS6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pabpn1Q8CCS6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pabpn1Q8CCS6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Gm37305-201ENSMUST00000195714 4279 ntBASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Gm13937-201ENSMUST00000121000 988 ntBASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Gm4726-201ENSMUST00000135604 736 ntBASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Gm6019-201ENSMUST00000148369 736 ntBASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1Q8CCS6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pabpn1Q8CCS6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC20.31■□□□□ 0.84
Pabpn1Q8CCS6 AC130671.2-201ENSMUST00000227224 1621 ntBASIC20.31■□□□□ 0.84
Pabpn1Q8CCS6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pabpn1Q8CCS6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Pabpn1Q8CCS6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pabpn1Q8CCS6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pabpn1Q8CCS6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pabpn1Q8CCS6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pabpn1Q8CCS6 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC20.31■□□□□ 0.84
Pabpn1Q8CCS6 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Pabpn1Q8CCS6 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC20.31■□□□□ 0.84
Pabpn1Q8CCS6 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pabpn1Q8CCS6 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC20.31■□□□□ 0.84
Pabpn1Q8CCS6 Gm28388-201ENSMUST00000186262 437 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms