Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rft1Q8C3B8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gm24543-201ENSMUST00000103867 82 ntBASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gm13453-201ENSMUST00000118708 357 ntBASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gm38294-201ENSMUST00000192831 381 ntBASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gm6888-201ENSMUST00000221983 706 ntBASIC12.03□□□□□ -0.48
Rft1Q8C3B8 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.03□□□□□ -0.48
Rft1Q8C3B8 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Paupar-201ENSMUST00000194826 3482 ntBASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rft1Q8C3B8 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.02□□□□□ -0.48
Rft1Q8C3B8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rft1Q8C3B8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Rft1Q8C3B8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rft1Q8C3B8 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rft1Q8C3B8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Rft1Q8C3B8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Rft1Q8C3B8 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rft1Q8C3B8 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rft1Q8C3B8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Gm13223-201ENSMUST00000118609 747 ntBASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Gm10275-202ENSMUST00000168697 495 ntBASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.02□□□□□ -0.49
Rft1Q8C3B8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Gm10275-201ENSMUST00000092620 635 ntBASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rft1Q8C3B8 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms