Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Gm15770-201ENSMUST00000117498 584 ntBASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Gm14767-201ENSMUST00000121559 586 ntBASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Gm26308-201ENSMUST00000157768 69 ntBASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Gm27702-201ENSMUST00000184512 56 ntBASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Smim4Q8C1Q6 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Gm44344-201ENSMUST00000200287 129 ntBASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim4Q8C1Q6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smim4Q8C1Q6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smim4Q8C1Q6 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smim4Q8C1Q6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smim4Q8C1Q6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smim4Q8C1Q6 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smim4Q8C1Q6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smim4Q8C1Q6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Smim4Q8C1Q6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smim4Q8C1Q6 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smim4Q8C1Q6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smim4Q8C1Q6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim4Q8C1Q6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.27□□□□□ -0.61
Smim4Q8C1Q6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim4Q8C1Q6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim4Q8C1Q6 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim4Q8C1Q6 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim4Q8C1Q6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smim4Q8C1Q6 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.27□□□□□ -0.61
Smim4Q8C1Q6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms