Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.04□□□□□ -0.16
Sh3rf3Q8C120 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf3Q8C120 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf3Q8C120 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.04□□□□□ -0.16
Sh3rf3Q8C120 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.04□□□□□ -0.16
Sh3rf3Q8C120 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.04□□□□□ -0.16
Sh3rf3Q8C120 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf3Q8C120 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf3Q8C120 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf3Q8C120 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf3Q8C120 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf3Q8C120 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf3Q8C120 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf3Q8C120 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sh3rf3Q8C120 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.04□□□□□ -0.16
Sh3rf3Q8C120 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf3Q8C120 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf3Q8C120 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Gm27772-201ENSMUST00000184900 187 ntBASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Sh3rf3Q8C120 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.02□□□□□ -0.16
Sh3rf3Q8C120 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sh3rf3Q8C120 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh3rf3Q8C120 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms