Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Mir6420-201ENSMUST00000185032 102 ntBASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Gm37497-201ENSMUST00000195830 798 ntBASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Sh3rf2Q8BZT2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Gm6447-201ENSMUST00000118905 835 ntBASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf2Q8BZT2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms