Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scfd1Q8BRF7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Gm22018-201ENSMUST00000104357 131 ntBASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Gm6013-201ENSMUST00000212264 699 ntBASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Gm7399-201ENSMUST00000032395 858 ntBASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Scfd1Q8BRF7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Gm38002-201ENSMUST00000193255 180 ntBASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scfd1Q8BRF7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Gm15198-201ENSMUST00000117283 177 ntBASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Gm11637-201ENSMUST00000120601 592 ntBASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Gm16479-201ENSMUST00000121706 932 ntBASIC15.29■□□□□ 0.04
Scfd1Q8BRF7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms