Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 Gm16215-201ENSMUST00000161990 637 ntBASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 Gm20445-201ENSMUST00000061905 565 ntBASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh20Q8BIZ0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Gm15460-201ENSMUST00000118147 391 ntBASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Gm15321-201ENSMUST00000121290 288 ntBASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh20Q8BIZ0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh20Q8BIZ0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Pcdh20Q8BIZ0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh20Q8BIZ0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh20Q8BIZ0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh20Q8BIZ0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Gm29667-201ENSMUST00000190817 490 ntBASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh20Q8BIZ0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh20Q8BIZ0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms