Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SynbQ8BI41 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SynbQ8BI41 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SynbQ8BI41 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SynbQ8BI41 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SynbQ8BI41 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SynbQ8BI41 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.89□□□□□ -0.35
SynbQ8BI41 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SynbQ8BI41 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SynbQ8BI41 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.89□□□□□ -0.35
SynbQ8BI41 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SynbQ8BI41 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SynbQ8BI41 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SynbQ8BI41 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SynbQ8BI41 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
SynbQ8BI41 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SynbQ8BI41 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.88□□□□□ -0.35
SynbQ8BI41 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SynbQ8BI41 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SynbQ8BI41 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.88□□□□□ -0.35
SynbQ8BI41 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
SynbQ8BI41 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SynbQ8BI41 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SynbQ8BI41 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Gm37714-201ENSMUST00000194742 342 ntBASIC12.88□□□□□ -0.35
SynbQ8BI41 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
SynbQ8BI41 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.88□□□□□ -0.35
SynbQ8BI41 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SynbQ8BI41 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SynbQ8BI41 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SynbQ8BI41 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.88□□□□□ -0.35
SynbQ8BI41 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SynbQ8BI41 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SynbQ8BI41 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.87□□□□□ -0.35
SynbQ8BI41 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SynbQ8BI41 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.87□□□□□ -0.35
SynbQ8BI41 Gm11524-201ENSMUST00000119349 807 ntBASIC12.87□□□□□ -0.35
SynbQ8BI41 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.87□□□□□ -0.35
SynbQ8BI41 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.87□□□□□ -0.35
SynbQ8BI41 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SynbQ8BI41 Gm7287-201ENSMUST00000205267 602 ntBASIC12.87□□□□□ -0.35
SynbQ8BI41 Gm19078-201ENSMUST00000206311 727 ntBASIC12.87□□□□□ -0.35
SynbQ8BI41 Gm45331-201ENSMUST00000209868 554 ntBASIC12.87□□□□□ -0.35
SynbQ8BI41 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.87□□□□□ -0.35
SynbQ8BI41 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SynbQ8BI41 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SynbQ8BI41 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.87□□□□□ -0.35
SynbQ8BI41 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SynbQ8BI41 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SynbQ8BI41 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SynbQ8BI41 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms