Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Gm12151-201ENSMUST00000121374 290 ntBASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Clrn3Q8BHH8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Gm15240-201ENSMUST00000118156 720 ntBASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn3Q8BHH8 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 Gm15487-201ENSMUST00000122373 465 ntBASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 Gm20949-201ENSMUST00000206478 952 ntBASIC12.67□□□□□ -0.38
Clrn3Q8BHH8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms