Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Gm7488-201ENSMUST00000117148 684 ntBASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Gm18027-201ENSMUST00000218947 619 ntBASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Samm50Q8BGH2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.78■□□□□ 0.12
Samm50Q8BGH2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Gm37714-201ENSMUST00000194742 342 ntBASIC15.78■□□□□ 0.12
Samm50Q8BGH2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Samm50Q8BGH2 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Gm4804-201ENSMUST00000182234 999 ntBASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Gm29741-201ENSMUST00000192667 421 ntBASIC15.77■□□□□ 0.12
Samm50Q8BGH2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms