Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Mir698-201ENSMUST00000102164 109 ntBASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Gm13365-201ENSMUST00000121188 973 ntBASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim6Q8BGE7 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Gm5264-201ENSMUST00000190584 848 ntBASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Dupd1-202ENSMUST00000224735 548 ntBASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.29□□□□□ -0.12
Trim6Q8BGE7 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.29□□□□□ -0.12
Trim6Q8BGE7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim6Q8BGE7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Gm18766-201ENSMUST00000189811 808 ntBASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Gm6916-202ENSMUST00000205523 195 ntBASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms