Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Mir6392-201ENSMUST00000184924 108 ntBASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Gm18307-201ENSMUST00000206864 949 ntBASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
Atg4bQ8BGE6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Gm13689-201ENSMUST00000119360 685 ntBASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Gm29608-201ENSMUST00000190444 463 ntBASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Gm15823-201ENSMUST00000064305 670 ntBASIC12.67□□□□□ -0.38
Atg4bQ8BGE6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms