Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Gm8805-201ENSMUST00000117848 313 ntBASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Gm12241-201ENSMUST00000118330 726 ntBASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Gm11591-201ENSMUST00000120063 702 ntBASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Gm18827-201ENSMUST00000188341 790 ntBASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Gm6447-201ENSMUST00000118905 835 ntBASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp6nlQ80XC3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp6nlQ80XC3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp6nlQ80XC3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp6nlQ80XC3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp6nlQ80XC3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Usp6nlQ80XC3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp6nlQ80XC3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Usp6nlQ80XC3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp6nlQ80XC3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp6nlQ80XC3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp6nlQ80XC3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp6nlQ80XC3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp6nlQ80XC3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp6nlQ80XC3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Usp6nlQ80XC3 Gm10608-202ENSMUST00000213924 676 ntBASIC14.8□□□□□ -0.04
Usp6nlQ80XC3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.8□□□□□ -0.04
Usp6nlQ80XC3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.8□□□□□ -0.04
Usp6nlQ80XC3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms