Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Mir1982-201ENSMUST00000157368 74 ntBASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Gm24196-201ENSMUST00000179161 110 ntBASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 AY702102-202ENSMUST00000194651 1173 ntBASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh19Q80TF3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.21□□□□□ -0.3
Pcdh19Q80TF3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
Pcdh19Q80TF3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh19Q80TF3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh19Q80TF3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh19Q80TF3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.21□□□□□ -0.3
Pcdh19Q80TF3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh19Q80TF3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh19Q80TF3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Gm24644-201ENSMUST00000157114 139 ntBASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Mir7085-201ENSMUST00000184353 66 ntBASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Gm16372-201ENSMUST00000073088 450 ntBASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh19Q80TF3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Gm8213-201ENSMUST00000118191 441 ntBASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Gm5687-201ENSMUST00000118252 640 ntBASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Gm7561-201ENSMUST00000211203 886 ntBASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 AC073947.1-201ENSMUST00000216991 649 ntBASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh19Q80TF3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdh19Q80TF3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms