Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pif1Q80SX8 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.46□□□□□ -0.42
Pif1Q80SX8 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.46□□□□□ -0.42
Pif1Q80SX8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pif1Q80SX8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Pif1Q80SX8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pif1Q80SX8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pif1Q80SX8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pif1Q80SX8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.45□□□□□ -0.42
Pif1Q80SX8 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.45□□□□□ -0.42
Pif1Q80SX8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.45□□□□□ -0.42
Pif1Q80SX8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.45□□□□□ -0.42
Pif1Q80SX8 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.44□□□□□ -0.42
Pif1Q80SX8 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Matn2-206ENSMUST00000228570 2798 ntBASIC12.44□□□□□ -0.42
Pif1Q80SX8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Gm23931-201ENSMUST00000103842 109 ntBASIC12.44□□□□□ -0.42
Pif1Q80SX8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.44□□□□□ -0.42
Pif1Q80SX8 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Gm27514-201ENSMUST00000183692 110 ntBASIC12.44□□□□□ -0.42
Pif1Q80SX8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.44□□□□□ -0.42
Pif1Q80SX8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.44□□□□□ -0.42
Pif1Q80SX8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.44□□□□□ -0.42
Pif1Q80SX8 Gm8598-201ENSMUST00000221184 836 ntBASIC12.44□□□□□ -0.42
Pif1Q80SX8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.44□□□□□ -0.42
Pif1Q80SX8 Itm2b-204ENSMUST00000228637 783 ntBASIC12.44□□□□□ -0.42
Pif1Q80SX8 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Gm7399-201ENSMUST00000032395 858 ntBASIC12.44□□□□□ -0.42
Pif1Q80SX8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.44□□□□□ -0.42
Pif1Q80SX8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pif1Q80SX8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms