Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Gm45841-201ENSMUST00000207700 164 ntBASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Gm9899-201ENSMUST00000065519 555 ntBASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Gm24447-201ENSMUST00000083977 338 ntBASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh8Q7TSK3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh8Q7TSK3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh8Q7TSK3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh8Q7TSK3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pcdh8Q7TSK3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh8Q7TSK3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh8Q7TSK3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.27□□□□□ -0.28
Pcdh8Q7TSK3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Gm6091-201ENSMUST00000098307 165 ntBASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Pcdh8Q7TSK3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Gm13612-201ENSMUST00000119276 390 ntBASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Mir1938-201ENSMUST00000158746 100 ntBASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Gm7561-201ENSMUST00000211203 886 ntBASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh8Q7TSK3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms