Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctdp1Q7TSG2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Gm37714-201ENSMUST00000194742 342 ntBASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
Ctdp1Q7TSG2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Gm29541-201ENSMUST00000191351 678 ntBASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Mir125a-201ENSMUST00000083545 68 ntBASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.67□□□□□ -0.06
Ctdp1Q7TSG2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Ctdp1Q7TSG2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctdp1Q7TSG2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms