Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Scaf4Q6PFF0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Scaf4Q6PFF0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Scaf4Q6PFF0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Scaf4Q6PFF0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scaf4Q6PFF0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scaf4Q6PFF0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scaf4Q6PFF0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scaf4Q6PFF0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Mir6990-201ENSMUST00000183724 91 ntBASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scaf4Q6PFF0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Gm25911-201ENSMUST00000157621 56 ntBASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scaf4Q6PFF0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Gm6912-201ENSMUST00000117218 544 ntBASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Gm15770-201ENSMUST00000117498 584 ntBASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Mir1897-201ENSMUST00000122581 272 ntBASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scaf4Q6PFF0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms