Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.32□□□□□ -0.12
CtifQ6PEE2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.32□□□□□ -0.12
CtifQ6PEE2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Gm7222-201ENSMUST00000117512 906 ntBASIC14.31□□□□□ -0.12
CtifQ6PEE2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Mir7221-201ENSMUST00000184009 72 ntBASIC14.31□□□□□ -0.12
CtifQ6PEE2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.31□□□□□ -0.12
CtifQ6PEE2 Gm8000-201ENSMUST00000188378 592 ntBASIC14.31□□□□□ -0.12
CtifQ6PEE2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.31□□□□□ -0.12
CtifQ6PEE2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtifQ6PEE2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.3□□□□□ -0.12
CtifQ6PEE2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CtifQ6PEE2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.3□□□□□ -0.12
CtifQ6PEE2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.3□□□□□ -0.12
CtifQ6PEE2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.3□□□□□ -0.12
CtifQ6PEE2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms