Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 Mir3102-201ENSMUST00000175555 104 ntBASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 Gm15459-201ENSMUST00000117405 1941 ntBASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 Gm8355-201ENSMUST00000177767 1941 ntBASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd4Q6PDQ2 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Gm27046-201ENSMUST00000182160 463 ntBASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 AA914427-201ENSMUST00000193194 1166 ntBASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Gm31256-201ENSMUST00000194705 506 ntBASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Gm14208-201ENSMUST00000119645 678 ntBASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Gm13875-201ENSMUST00000120162 282 ntBASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Ighv5-7-201ENSMUST00000192302 244 ntBASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Gm5989-201ENSMUST00000096092 2077 ntBASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chd4Q6PDQ2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Gm2420-202ENSMUST00000202224 2249 ntBASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd4Q6PDQ2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Gm26956-201ENSMUST00000182176 986 ntBASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Gm43068-201ENSMUST00000201095 1273 ntBASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 CT025533.2-201ENSMUST00000228715 1248 ntBASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd4Q6PDQ2 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms