Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Gm26308-201ENSMUST00000157768 69 ntBASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Gm8927-201ENSMUST00000181978 981 ntBASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Gm9229-201ENSMUST00000222777 126 ntBASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Shd-206ENSMUST00000225145 998 ntBASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Gm3222-201ENSMUST00000071282 990 ntBASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Gm15693-201ENSMUST00000120470 637 ntBASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Gm4804-201ENSMUST00000182234 999 ntBASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smarcd3Q6P9Z1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Mir449b-201ENSMUST00000104833 80 ntBASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Gm27622-201ENSMUST00000183779 60 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms