Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Gm45118-201ENSMUST00000208928 825 ntBASIC20.33■□□□□ 0.84
Slx4Q6P1D7 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slx4Q6P1D7 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slx4Q6P1D7 Gm43056-201ENSMUST00000197865 2791 ntBASIC20.33■□□□□ 0.84
Slx4Q6P1D7 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slx4Q6P1D7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slx4Q6P1D7 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slx4Q6P1D7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Gm13736-201ENSMUST00000119272 253 ntBASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Slx4Q6P1D7 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Gm6335-201ENSMUST00000118081 1194 ntBASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Gm7816-201ENSMUST00000119884 1194 ntBASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Gm8566-201ENSMUST00000120174 465 ntBASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Gm15542-201ENSMUST00000121585 1194 ntBASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 AC113031.8-201ENSMUST00000227856 631 ntBASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slx4Q6P1D7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slx4Q6P1D7 Gm12208-201ENSMUST00000122004 163 ntBASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 AC126444.1-201ENSMUST00000225938 1768 ntBASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC20.29■□□□□ 0.84
Slx4Q6P1D7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms