Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Gm15920-201ENSMUST00000118998 402 ntBASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Gm24694-201ENSMUST00000180054 110 ntBASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Gm27663-201ENSMUST00000184839 110 ntBASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sp140Q6NSQ5 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Gm15376-201ENSMUST00000122258 783 ntBASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Gm43094-201ENSMUST00000196549 921 ntBASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sp140Q6NSQ5 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Syt7-204ENSMUST00000223586 1344 ntBASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Gm15678-201ENSMUST00000117573 960 ntBASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Gm12403-201ENSMUST00000121384 959 ntBASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Mir7023-201ENSMUST00000185093 64 ntBASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sp140Q6NSQ5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms