Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Mir6546-201ENSMUST00000184460 62 ntBASIC15.91■□□□□ 0.14
Col11a2Q64739 Gm19187-201ENSMUST00000206781 892 ntBASIC15.91■□□□□ 0.14
Col11a2Q64739 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
Col11a2Q64739 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.91■□□□□ 0.14
Col11a2Q64739 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC15.91■□□□□ 0.14
Col11a2Q64739 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.91■□□□□ 0.14
Col11a2Q64739 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Col11a2Q64739 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col11a2Q64739 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.9■□□□□ 0.14
Col11a2Q64739 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col11a2Q64739 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col11a2Q64739 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Col11a2Q64739 AC122197.2-201ENSMUST00000219196 1635 ntBASIC15.9■□□□□ 0.14
Col11a2Q64739 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col11a2Q64739 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Col11a2Q64739 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col11a2Q64739 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Col11a2Q64739 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Col11a2Q64739 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col11a2Q64739 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.9■□□□□ 0.14
Col11a2Q64739 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col11a2Q64739 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col11a2Q64739 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.9■□□□□ 0.14
Col11a2Q64739 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col11a2Q64739 Gm19994-201ENSMUST00000217086 586 ntBASIC15.9■□□□□ 0.14
Col11a2Q64739 Gm10312-201ENSMUST00000078515 489 ntBASIC15.9■□□□□ 0.14
Col11a2Q64739 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col11a2Q64739 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col11a2Q64739 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Col11a2Q64739 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Col11a2Q64739 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col11a2Q64739 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col11a2Q64739 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col11a2Q64739 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Col11a2Q64739 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Col11a2Q64739 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.9■□□□□ 0.14
Col11a2Q64739 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col11a2Q64739 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col11a2Q64739 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.89■□□□□ 0.13
Col11a2Q64739 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Col11a2Q64739 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Col11a2Q64739 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC15.89■□□□□ 0.13
Col11a2Q64739 Mir6958-201ENSMUST00000184207 73 ntBASIC15.89■□□□□ 0.13
Col11a2Q64739 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Col11a2Q64739 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.89■□□□□ 0.13
Col11a2Q64739 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Col11a2Q64739 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Col11a2Q64739 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.89■□□□□ 0.13
Col11a2Q64739 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col11a2Q64739 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col11a2Q64739 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.88■□□□□ 0.13
Col11a2Q64739 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col11a2Q64739 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.88■□□□□ 0.13
Col11a2Q64739 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.88■□□□□ 0.13
Col11a2Q64739 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col11a2Q64739 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col11a2Q64739 Gm16296-201ENSMUST00000159905 325 ntBASIC15.88■□□□□ 0.13
Col11a2Q64739 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col11a2Q64739 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col11a2Q64739 Gm45598-202ENSMUST00000210719 986 ntBASIC15.88■□□□□ 0.13
Col11a2Q64739 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.88■□□□□ 0.13
Col11a2Q64739 AC159205.5-202ENSMUST00000224849 386 ntBASIC15.88■□□□□ 0.13
Col11a2Q64739 AC163667.3-201ENSMUST00000225774 222 ntBASIC15.88■□□□□ 0.13
Col11a2Q64739 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col11a2Q64739 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Col11a2Q64739 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col11a2Q64739 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Col11a2Q64739 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col11a2Q64739 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col11a2Q64739 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Col11a2Q64739 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col11a2Q64739 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC15.88■□□□□ 0.13
Col11a2Q64739 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col11a2Q64739 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col11a2Q64739 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col11a2Q64739 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col11a2Q64739 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col11a2Q64739 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms