Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ctr9Q62018 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ctr9Q62018 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ctr9Q62018 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ctr9Q62018 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ctr9Q62018 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ctr9Q62018 Gm4984-201ENSMUST00000115987 360 ntBASIC15.86■□□□□ 0.13
Ctr9Q62018 Gm15824-201ENSMUST00000119516 955 ntBASIC15.86■□□□□ 0.13
Ctr9Q62018 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ctr9Q62018 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.86■□□□□ 0.13
Ctr9Q62018 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.86■□□□□ 0.13
Ctr9Q62018 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Ctr9Q62018 Itm2b-204ENSMUST00000228637 783 ntBASIC15.86■□□□□ 0.13
Ctr9Q62018 Gm6091-201ENSMUST00000098307 165 ntBASIC15.86■□□□□ 0.13
Ctr9Q62018 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ctr9Q62018 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ctr9Q62018 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ctr9Q62018 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ctr9Q62018 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.86■□□□□ 0.13
Ctr9Q62018 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ctr9Q62018 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ctr9Q62018 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.86■□□□□ 0.13
Ctr9Q62018 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ctr9Q62018 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.85■□□□□ 0.13
Ctr9Q62018 Gm11803-201ENSMUST00000119966 444 ntBASIC15.85■□□□□ 0.13
Ctr9Q62018 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.85■□□□□ 0.13
Ctr9Q62018 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.85■□□□□ 0.13
Ctr9Q62018 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.85■□□□□ 0.13
Ctr9Q62018 Gm24196-201ENSMUST00000179161 110 ntBASIC15.85■□□□□ 0.13
Ctr9Q62018 Mir7085-201ENSMUST00000184353 66 ntBASIC15.85■□□□□ 0.13
Ctr9Q62018 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.85■□□□□ 0.13
Ctr9Q62018 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.85■□□□□ 0.13
Ctr9Q62018 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Ctr9Q62018 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.85■□□□□ 0.13
Ctr9Q62018 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ctr9Q62018 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ctr9Q62018 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ctr9Q62018 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.84■□□□□ 0.13
Ctr9Q62018 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.84■□□□□ 0.13
Ctr9Q62018 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.84■□□□□ 0.13
Ctr9Q62018 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Proscos-202ENSMUST00000178990 666 ntBASIC15.84■□□□□ 0.13
Ctr9Q62018 Gm27847-201ENSMUST00000183711 107 ntBASIC15.84■□□□□ 0.13
Ctr9Q62018 Gm27375-201ENSMUST00000183799 107 ntBASIC15.84■□□□□ 0.13
Ctr9Q62018 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.84■□□□□ 0.13
Ctr9Q62018 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.84■□□□□ 0.13
Ctr9Q62018 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.84■□□□□ 0.13
Ctr9Q62018 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.84■□□□□ 0.13
Ctr9Q62018 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.84■□□□□ 0.13
Ctr9Q62018 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ctr9Q62018 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Ctr9Q62018 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.84■□□□□ 0.13
Ctr9Q62018 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ctr9Q62018 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ctr9Q62018 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.83■□□□□ 0.13
Ctr9Q62018 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.13
Ctr9Q62018 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ctr9Q62018 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.83■□□□□ 0.13
Ctr9Q62018 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
Ctr9Q62018 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ctr9Q62018 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms