Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm42929-201ENSMUST00000198374 1286 ntBASIC14□□□□□ -0.17
Smarcd1Q61466 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14□□□□□ -0.17
Smarcd1Q61466 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Gm15222-202ENSMUST00000228667 1726 ntBASIC14□□□□□ -0.17
Smarcd1Q61466 Gm42769-201ENSMUST00000198576 1659 ntBASIC14□□□□□ -0.17
Smarcd1Q61466 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14□□□□□ -0.17
Smarcd1Q61466 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Abhd6-203ENSMUST00000225234 1958 ntBASIC14□□□□□ -0.17
Smarcd1Q61466 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smarcd1Q61466 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.99□□□□□ -0.17
Smarcd1Q61466 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.99□□□□□ -0.17
Smarcd1Q61466 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Gm10156-201ENSMUST00000122364 462 ntBASIC13.99□□□□□ -0.17
Smarcd1Q61466 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Gm7561-201ENSMUST00000211203 886 ntBASIC13.99□□□□□ -0.17
Smarcd1Q61466 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Gm6091-201ENSMUST00000098307 165 ntBASIC13.99□□□□□ -0.17
Smarcd1Q61466 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd1Q61466 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.98□□□□□ -0.17
Smarcd1Q61466 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.98□□□□□ -0.17
Smarcd1Q61466 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Gm8810-201ENSMUST00000172895 754 ntBASIC13.98□□□□□ -0.17
Smarcd1Q61466 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.98□□□□□ -0.17
Smarcd1Q61466 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Gm16372-201ENSMUST00000073088 450 ntBASIC13.98□□□□□ -0.17
Smarcd1Q61466 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarcd1Q61466 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.98□□□□□ -0.17
Smarcd1Q61466 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Smarcd1Q61466 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms