Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.57□□□□□ -0.24
Six4Q61321 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.57□□□□□ -0.24
Six4Q61321 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.57□□□□□ -0.24
Six4Q61321 Gm12928-201ENSMUST00000117115 573 ntBASIC13.57□□□□□ -0.24
Six4Q61321 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.57□□□□□ -0.24
Six4Q61321 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Six4Q61321 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Six4Q61321 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.57□□□□□ -0.24
Six4Q61321 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.57□□□□□ -0.24
Six4Q61321 Gm7653-201ENSMUST00000214567 508 ntBASIC13.57□□□□□ -0.24
Six4Q61321 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.57□□□□□ -0.24
Six4Q61321 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.57□□□□□ -0.24
Six4Q61321 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six4Q61321 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Six4Q61321 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.56□□□□□ -0.24
Six4Q61321 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.56□□□□□ -0.24
Six4Q61321 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Six4Q61321 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Six4Q61321 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.56□□□□□ -0.24
Six4Q61321 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.56□□□□□ -0.24
Six4Q61321 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.56□□□□□ -0.24
Six4Q61321 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.56□□□□□ -0.24
Six4Q61321 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Six4Q61321 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Six4Q61321 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.56□□□□□ -0.24
Six4Q61321 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six4Q61321 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.55□□□□□ -0.24
Six4Q61321 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.55□□□□□ -0.24
Six4Q61321 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Six4Q61321 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.55□□□□□ -0.24
Six4Q61321 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.55□□□□□ -0.24
Six4Q61321 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Six4Q61321 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
Six4Q61321 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.55□□□□□ -0.24
Six4Q61321 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six4Q61321 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Six4Q61321 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Six4Q61321 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms