Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Mre11Q61216 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Mre11Q61216 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.11■□□□□ 0.17
Mre11Q61216 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.11■□□□□ 0.17
Mre11Q61216 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Mre11Q61216 AV026068-213ENSMUST00000223675 1171 ntBASIC16.11■□□□□ 0.17
Mre11Q61216 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.11■□□□□ 0.17
Mre11Q61216 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mre11Q61216 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mre11Q61216 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Mre11Q61216 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Mre11Q61216 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Mre11Q61216 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.1■□□□□ 0.17
Mre11Q61216 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Mre11Q61216 Gm9385-201ENSMUST00000117563 472 ntBASIC16.1■□□□□ 0.17
Mre11Q61216 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.1■□□□□ 0.17
Mre11Q61216 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.1■□□□□ 0.17
Mre11Q61216 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Mre11Q61216 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Mre11Q61216 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Mre11Q61216 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Mre11Q61216 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC16.1■□□□□ 0.17
Mre11Q61216 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Mre11Q61216 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Mre11Q61216 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Mre11Q61216 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Mre11Q61216 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.1■□□□□ 0.17
Mre11Q61216 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.1■□□□□ 0.17
Mre11Q61216 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Mre11Q61216 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mre11Q61216 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Mre11Q61216 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.09■□□□□ 0.17
Mre11Q61216 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
Mre11Q61216 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Mre11Q61216 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.09■□□□□ 0.17
Mre11Q61216 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 Gm5177-201ENSMUST00000183092 997 ntBASIC16.09■□□□□ 0.17
Mre11Q61216 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.09■□□□□ 0.17
Mre11Q61216 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.09■□□□□ 0.17
Mre11Q61216 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.09■□□□□ 0.17
Mre11Q61216 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.09■□□□□ 0.17
Mre11Q61216 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Mre11Q61216 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.09■□□□□ 0.17
Mre11Q61216 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Mre11Q61216 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Mre11Q61216 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Mre11Q61216 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Mre11Q61216 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mre11Q61216 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC16.08■□□□□ 0.17
Mre11Q61216 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Mre11Q61216 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Mre11Q61216 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Mre11Q61216 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Mre11Q61216 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Mre11Q61216 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC16.08■□□□□ 0.17
Mre11Q61216 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Mre11Q61216 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Mre11Q61216 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mre11Q61216 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Mre11Q61216 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mre11Q61216 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Mre11Q61216 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Mre11Q61216 Mir698-201ENSMUST00000102164 109 ntBASIC16.08■□□□□ 0.16
Mre11Q61216 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms