Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ripk1Q60855 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ripk1Q60855 Gm15770-201ENSMUST00000117498 584 ntBASIC12.71□□□□□ -0.37
Ripk1Q60855 Gm14719-201ENSMUST00000121891 340 ntBASIC12.71□□□□□ -0.37
Ripk1Q60855 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ripk1Q60855 Gm21854-201ENSMUST00000179901 471 ntBASIC12.71□□□□□ -0.37
Ripk1Q60855 Gm24694-201ENSMUST00000180054 110 ntBASIC12.71□□□□□ -0.37
Ripk1Q60855 Gm27663-201ENSMUST00000184839 110 ntBASIC12.71□□□□□ -0.37
Ripk1Q60855 Gm29667-201ENSMUST00000190817 490 ntBASIC12.71□□□□□ -0.37
Ripk1Q60855 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ripk1Q60855 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ripk1Q60855 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.71□□□□□ -0.37
Ripk1Q60855 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ripk1Q60855 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Ripk1Q60855 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ripk1Q60855 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.71□□□□□ -0.37
Ripk1Q60855 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.71□□□□□ -0.37
Ripk1Q60855 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ripk1Q60855 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.71□□□□□ -0.38
Ripk1Q60855 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.71□□□□□ -0.38
Ripk1Q60855 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ripk1Q60855 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ripk1Q60855 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ripk1Q60855 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ripk1Q60855 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ripk1Q60855 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.71□□□□□ -0.38
Ripk1Q60855 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ripk1Q60855 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.7□□□□□ -0.38
Ripk1Q60855 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.7□□□□□ -0.38
Ripk1Q60855 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ripk1Q60855 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ripk1Q60855 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ripk1Q60855 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Ripk1Q60855 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Ripk1Q60855 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ripk1Q60855 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ripk1Q60855 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ripk1Q60855 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.69□□□□□ -0.38
Ripk1Q60855 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ripk1Q60855 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ripk1Q60855 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ripk1Q60855 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.69□□□□□ -0.38
Ripk1Q60855 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.69□□□□□ -0.38
Ripk1Q60855 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ripk1Q60855 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ripk1Q60855 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ripk1Q60855 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ripk1Q60855 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ripk1Q60855 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ripk1Q60855 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ripk1Q60855 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ripk1Q60855 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ripk1Q60855 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms