Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm20445-201ENSMUST00000061905 565 ntBASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav5d-4Q5R1F6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.58□□□□□ -0.55
Trav5d-4Q5R1F6 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.58□□□□□ -0.55
Trav5d-4Q5R1F6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.55
Trav5d-4Q5R1F6 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Mir7684-201ENSMUST00000183858 60 ntBASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Gm27838-201ENSMUST00000184829 128 ntBASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Gm29667-201ENSMUST00000190817 490 ntBASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav5d-4Q5R1F6 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Gm27772-201ENSMUST00000184900 187 ntBASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav5d-4Q5R1F6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms