Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scn2bQ56A07 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scn2bQ56A07 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Gm13385-201ENSMUST00000121089 220 ntBASIC13.33□□□□□ -0.28
Scn2bQ56A07 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Gm3436-201ENSMUST00000179930 840 ntBASIC13.33□□□□□ -0.28
Scn2bQ56A07 Mir7684-201ENSMUST00000183858 60 ntBASIC13.33□□□□□ -0.28
Scn2bQ56A07 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.33□□□□□ -0.28
Scn2bQ56A07 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn2bQ56A07 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn2bQ56A07 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.32□□□□□ -0.28
Scn2bQ56A07 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Syt7-205ENSMUST00000224135 1557 ntBASIC13.32□□□□□ -0.28
Scn2bQ56A07 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.32□□□□□ -0.28
Scn2bQ56A07 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn2bQ56A07 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn2bQ56A07 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.31□□□□□ -0.28
Scn2bQ56A07 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.31□□□□□ -0.28
Scn2bQ56A07 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.31□□□□□ -0.28
Scn2bQ56A07 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.31□□□□□ -0.28
Scn2bQ56A07 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.31□□□□□ -0.28
Scn2bQ56A07 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Gm27321-201ENSMUST00000185021 205 ntBASIC13.31□□□□□ -0.28
Scn2bQ56A07 Gm10766-202ENSMUST00000194123 606 ntBASIC13.31□□□□□ -0.28
Scn2bQ56A07 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.31□□□□□ -0.28
Scn2bQ56A07 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.31□□□□□ -0.28
Scn2bQ56A07 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.31□□□□□ -0.28
Scn2bQ56A07 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn2bQ56A07 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn2bQ56A07 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms