Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Gm17420-201ENSMUST00000164753 153 ntBASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Gm27514-201ENSMUST00000183692 110 ntBASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Gm27682-201ENSMUST00000183930 110 ntBASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Gm44069-201ENSMUST00000204898 506 ntBASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Gm10478-201ENSMUST00000084451 396 ntBASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38aQ4FK66 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Gm5187-201ENSMUST00000117317 991 ntBASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38aQ4FK66 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.65■□□□□ 0.1
Prpf38aQ4FK66 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Prpf38aQ4FK66 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38aQ4FK66 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38aQ4FK66 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Prpf38aQ4FK66 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Prpf38aQ4FK66 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.65■□□□□ 0.1
Prpf38aQ4FK66 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.65■□□□□ 0.1
Prpf38aQ4FK66 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Prpf38aQ4FK66 Gm5370-201ENSMUST00000187187 574 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms