Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhlrc4Q3UP44 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhlrc4Q3UP44 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nhlrc4Q3UP44 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nhlrc4Q3UP44 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.37□□□□□ -0.43
Nhlrc4Q3UP44 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhlrc4Q3UP44 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.37□□□□□ -0.43
Nhlrc4Q3UP44 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhlrc4Q3UP44 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nhlrc4Q3UP44 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nhlrc4Q3UP44 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Gm12928-201ENSMUST00000117115 573 ntBASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Gm12490-201ENSMUST00000120255 560 ntBASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Gm9794-201ENSMUST00000202370 423 ntBASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Gm45841-201ENSMUST00000207700 164 ntBASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nhlrc4Q3UP44 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms